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Nonuniform sampling in multidimensional NMR for improving spectral sensitivity.
Zambrello, Matthew A; Schuyler, Adam D; Maciejewski, Mark W; Delaglio, Frank; Bezsonova, Irina; Hoch, Jeffrey C Methods (San Diego, Calif.) 2018 Mar;138-13962-68
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Practical Nonuniform Sampling and Non-Fourier Spectral Reconstruction for Multidimensional NMR.
Maciejewski, Mark W; Schuyler, Adam D; Hoch, Jeffrey C Methods in molecular biology (Clifton, N.J.) 2018 Jan;1688341-352
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Robust and transferable quantification of NMR spectral quality using IROC analysis.
Zambrello, Matthew A; Maciejewski, Mark W; Schuyler, Adam D; Weatherby, Gerard; Hoch, Jeffrey C Journal of magnetic resonance (San Diego, Calif. : 1997) 2017 Oct;28537-46
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NMRbox: A Resource for Biomolecular NMR Computation.
Maciejewski, Mark W; Schuyler, Adam D; Gryk, Michael R; Moraru, Ion I; Romero, Pedro R; Ulrich, Eldon L; Eghbalnia, Hamid R; Livny, Miron; Delaglio, Frank; Hoch, Jeffrey C Biophysical journal 2017 Apr;112(8):1529-1534
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Nuclear Magnetic Resonance Structures of GCN4p Are Largely Conserved When Ion Pairs Are Disrupted at Acidic pH but Show a Relaxation of the Coiled Coil Superhelix.
Kaplan, Anne R; Brady, Megan R; Maciejewski, Mark W; Kammerer, Richard A; Alexandrescu, Andrei T Biochemistry 2017 Mar;56(11):1604-1619
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NMR assignments for the insertion domain of bacteriophage CUS-3 coat protein.
Tripler, Therese N; Maciejewski, Mark W; Teschke, Carolyn M; Alexandrescu, Andrei T Biomolecular NMR assignments 2015 Oct;9(2):333-6
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Nonuniform sampling of hypercomplex multidimensional NMR experiments: Dimensionality, quadrature phase and randomization.
Schuyler, Adam D; Maciejewski, Mark W; Stern, Alan S; Hoch, Jeffrey C Journal of magnetic resonance (San Diego, Calif. : 1997) 2015 May;254121-30
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Analysis of metabolism in dormant spores of Bacillus species by 31P nuclear magnetic resonance analysis of low-molecular-weight compounds.
Ghosh, Sonali; Korza, George; Maciejewski, Mark; Setlow, Peter Journal of bacteriology 2014 Dec;197(5):992-1001
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Nonuniform sampling and maximum entropy reconstruction in multidimensional NMR.
Hoch, Jeffrey C; Maciejewski, Mark W; Mobli, Mehdi; Schuyler, Adam D; Stern, Alan S Accounts of chemical research 2014 Jan;47(2):708-17
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NMR mapping of PCNA interaction with translesion synthesis DNA polymerase Rev1 mediated by Rev1-BRCT domain.
Pustovalova, Yulia; Maciejewski, Mark W; Korzhnev, Dmitry M Journal of molecular biology 2013 Sep;425(17):3091-105
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Crystal structure of the ubiquitin-like small archaeal modifier protein 2 from Haloferax volcanii.
Li, Yunfeng; Maciejewski, Mark W; Martin, Jonathan; Jin, Kai; Zhang, Yuhang; Maupin-Furlow, Julie A; Hao, Bing Protein science : a publication of the Protein Society 2013 Sep;22(9):1206-17
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Serine lipids of Porphyromonas gingivalis are human and mouse Toll-like receptor 2 ligands.
Clark, Robert B; Cervantes, Jorge L; Maciejewski, Mark W; Farrokhi, Vahid; Nemati, Reza; Yao, Xudong; Anstadt, Emily; Fujiwara, Mai; Wright, Kyle T; Riddle, Caroline; La Vake, Carson J; Salazar, Juan C; Finegold, Sydney; Nichols, Frank C Infection and immunity 2013 Sep;81(9):3479-89
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(1)H, (13)C, and (15)N chemical shift assignments for PfPMT, a phosphoethanolamine methyltransferase from Plasmodium falciparum.
Bezsonova, Irina; Rujan, Iulian; Bobenchik, April M; Gorbatyuk, Vitaliy; Maciejewski, Mark W; Gorbatyuk, Oksana; Hao, Bing; Arthanari, Haribabu; Mamoun, Choukri Ben; Hoch, Jeffrey C Biomolecular NMR assignments 2013 Apr;7(1):17-20
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Formalism for hypercomplex multidimensional NMR employing partial-component subsampling.
Schuyler, Adam D; Maciejewski, Mark W; Stern, Alan S; Hoch, Jeffrey C Journal of magnetic resonance (San Diego, Calif. : 1997) 2013 Feb;22720-4
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Sparse sampling methods in multidimensional NMR.
Mobli, Mehdi; Maciejewski, Mark W; Schuyler, Adam D; Stern, Alan S; Hoch, Jeffrey C Physical chemistry chemical physics : PCCP 2012 Aug;14(31):10835-43
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Data sampling in multidimensional NMR: fundamentals and strategies.
Maciejewski, Mark W; Mobli, Mehdi; Schuyler, Adam D; Stern, Alan S; Hoch, Jeffrey C Topics in current chemistry 2012 Jan;31649-77
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Random phase detection in multidimensional NMR.
Maciejewski, Mark W; Fenwick, Matthew; Schuyler, Adam D; Stern, Alan S; Gorbatyuk, Vitaliy; Hoch, Jeffrey C Proceedings of the National Academy of Sciences of the United States of America 2011 Oct;108(40):16640-4
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Knowledge-based nonuniform sampling in multidimensional NMR.
Schuyler, Adam D; Maciejewski, Mark W; Arthanari, Haribabu; Hoch, Jeffrey C Journal of biomolecular NMR 2011 Jul;50(3):247-62
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Nonuniform sampling and spectral aliasing.
Maciejewski, Mark W; Qui, Harry Z; Rujan, Iulian; Mobli, Mehdi; Hoch, Jeffrey C Journal of magnetic resonance (San Diego, Calif. : 1997) 2009 Jul;199(1):88-93
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A proposed syntax for Minimotif Semantics, version 1.
Vyas, Jay; Nowling, Ronald J; Maciejewski, Mark W; Rajasekaran, Sanguthevar; Gryk, Michael R; Schiller, Martin R BMC genomics 2009 Jan;10360
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Minimotif miner 2nd release: a database and web system for motif search.
Rajasekaran, Sanguthevar; Balla, Sudha; Gradie, Patrick; Gryk, Michael R; Kadaveru, Krishna; Kundeti, Vamsi; Maciejewski, Mark W; Mi, Tian; Rubino, Nicholas; Vyas, Jay; Schiller, Martin R Nucleic acids research 2009 Jan;37(Database issue):D185-90
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Randomization improves sparse sampling in multidimensional NMR.
Hoch, Jeffrey C; Maciejewski, Mark W; Filipovic, Blagoje Journal of magnetic resonance (San Diego, Calif. : 1997) 2008 Aug;193(2):317-20
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Automatic maximum entropy spectral reconstruction in NMR.
Mobli, Mehdi; Maciejewski, Mark W; Gryk, Michael R; Hoch, Jeffrey C Journal of biomolecular NMR 2007 Oct;39(2):133-9
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Mapping the phosphoinositide-binding site on chick cofilin explains how PIP2 regulates the cofilin-actin interaction.
Gorbatyuk, Vitaliy Y; Nosworthy, Neil J; Robson, Scott A; Bains, Naresh P S; Maciejewski, Mark W; Dos Remedios, Cris G; King, Glenn F Molecular cell 2006 Nov;24(4):511-22
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Regulation of RhoGEF activity by intramolecular and intermolecular SH3 domain interactions.
Schiller, Martin R; Chakrabarti, Kausik; King, Glenn F; Schiller, Noraisha I; Eipper, Betty A; Maciejewski, Mark W The Journal of biological chemistry 2006 Jul;281(27):18774-86
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Levels of glycine betaine in growing cells and spores of Bacillus species and lack of effect of glycine betaine on dormant spore resistance.
Loshon, Charles A; Wahome, Paul G; Maciejewski, Mark W; Setlow, Peter Journal of bacteriology 2006 Apr;188(8):3153-8
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Minimotif Miner: a tool for investigating protein function.
Balla, Sudha; Thapar, Vishal; Verma, Snigdha; Luong, Thaibinh; Faghri, Tanaz; Huang, Chun-Hsi; Rajasekaran, Sanguthevar; del Campo, Jacob J; Shinn, Jessica H; Mohler, William A; Maciejewski, Mark W; Gryk, Michael R; Piccirillo, Bryan; Schiller, Stanley R; Schiller, Martin R Nature methods 2006 Mar;3(3):175-7
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High-performance exact algorithms for motif search.
Rajasekaran, Sanguthevar; Balla, Sudha; Huang, Chun-Hsi; Thapar, Vishal; Gryk, Michael; Maciejewski, Mark; Schiller, Martin Journal of clinical monitoring and computing 2005 Oct;19(4-5):319-28
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Backbone and side-chain 1H, 15N, and 13C assignments for the beta domain of the bacterial cell division protein DivIB.
Robson, Scott A; Gorbatyuk, Vitaliy Y; Maciejewski, Mark W; King, Glenn F Journal of biomolecular NMR 2005 Mar;31(3):261-2
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Solution structure of the Tctex1 dimer reveals a mechanism for dynein-cargo interactions.
Wu, Hongwei; Maciejewski, Mark W; Takebe, Sachiko; King, Stephen M Structure (London, England : 1993) 2005 Feb;13(2):213-23
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Stability of loops in the structure of lactose permease.
Bennett, Michael; Yeagle, James A; Maciejewski, Mark; Ocampo, James; Yeagle, Philip L Biochemistry 2004 Oct;43(40):12829-37
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Structural studies of the putative helix 8 in the human beta(2) adrenergic receptor: an NMR study.
Katragadda, M; Maciejewski, M W; Yeagle, P L Biochimica et biophysica acta 2004 May;1663(1-2):74-81
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Structure and mechanism of action of Sda, an inhibitor of the histidine kinases that regulate initiation of sporulation in Bacillus subtilis.
Rowland, Susan L; Burkholder, William F; Cunningham, Katherine A; Maciejewski, Mark W; Grossman, Alan D; King, Glenn F Molecular cell 2004 Mar;13(5):689-701
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Modulation of agrin function by alternative splicing and Ca2+ binding.
Stetefeld, Jörg; Alexandrescu, Andrei T; Maciejewski, Mark W; Jenny, Margrit; Rathgeb-Szabo, Klara; Schulthess, Therese; Landwehr, Ruth; Frank, Sabine; Ruegg, Markus A; Kammerer, Richard A Structure (London, England : 1993) 2004 Mar;12(3):503-15
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Relaxation-based structure refinement and backbone molecular dynamics of the dynein motor domain-associated light chain.
Wu, Hongwei; Blackledge, Martin; Maciejewski, Mark W; Mullen, Gregory P; King, Stephen M Biochemistry 2003 Jan;42(1):57-71
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Mapping of the interaction interface of DNA polymerase beta with XRCC1.
Gryk, Michael R; Marintchev, Assen; Maciejewski, Mark W; Robertson, Anthony; Wilson, Samuel H; Mullen, Gregory P Structure (London, England : 1993) 2002 Dec;10(12):1709-20
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Backbone and side-chain 1H, 15N, and 13C assignments for chick cofilin.
Bains, Naresh P S; Gorbatyuk, Vitaliy Y; Nosworthy, Neil J; Robson, Scott A; Maciejewski, Mark W; dos Remedios, Cristobal G; King, Glenn F Journal of biomolecular NMR 2002 Feb;22(2):193-4
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Solution structure of a viral DNA repair polymerase.
Maciejewski, M W; Shin, R; Pan, B; Marintchev, A; Denninger, A; Mullen, M A; Chen, K; Gryk, M R; Mullen, G P Nature structural biology 2001 Nov;8(11):936-41
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Solution structure of the catalytic domain of gammadelta resolvase. Implications for the mechanism of catalysis.
Pan, B; Maciejewski, M W; Marintchev, A; Mullen, G P Journal of molecular biology 2001 Jul;310(5):1089-107
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Structural basis for the topological specificity function of MinE.
King, G F; Shih, Y L; Maciejewski, M W; Bains, N P; Pan, B; Rowland, S L; Mullen, G P; Rothfield, L I Nature structural biology 2000 Nov;7(11):1013-7
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Solution structure of a dynein motor domain associated light chain.
Wu, H; Maciejewski, M W; Marintchev, A; Benashski, S E; Mullen, G P; King, S M Nature structural biology 2000 Jul;7(7):575-9
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Discovery and characterization of a family of insecticidal neurotoxins with a rare vicinal disulfide bridge.
Wang, X; Connor, M; Smith, R; Maciejewski, M W; Howden, M E; Nicholson, G M; Christie, M J; King, G F Nature structural biology 2000 Jun;7(6):505-13
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Backbone dynamics and refined solution structure of the N-terminal domain of DNA polymerase beta. Correlation with DNA binding and dRP lyase activity.
Maciejewski, M W; Liu, D; Prasad, R; Wilson, S H; Mullen, G P Journal of molecular biology 2000 Feb;296(1):229-53
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Solution structure of the single-strand break repair protein XRCC1 N-terminal domain.
Marintchev, A; Mullen, M A; Maciejewski, M W; Pan, B; Gryk, M R; Mullen, G P Nature structural biology 1999 Sep;6(9):884-93
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Functional analysis of the amino-terminal 8-kDa domain of DNA polymerase beta as revealed by site-directed mutagenesis. DNA binding and 5'-deoxyribose phosphate lyase activities.
Prasad, R; Beard, W A; Chyan, J Y; Maciejewski, M W; Mullen, G P; Wilson, S H The Journal of biological chemistry 1998 May;273(18):11121-6
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Structure of a compact peptide from staphylococcal nuclease determined by circular dichroism and NMR spectroscopy.
Maciejewski, M W; Zehfus, M H Biochemistry 1995 May;34(17):5795-800
