John H. Carson, PhDProfessor, Department of Molecular Biology and Biophysics
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Name & Description | Category | Role | Type | Scope | Start Year | End Year |
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Health Center Appeals Committee | Advisory Committee | UConn Health | University | 2011 | ||
CHIPS | Advisory Committee | UConn Health | University | 2011 | ||
Cell Biol I execc omm | Education Committee | UConn Health | University | 2011 | ||
CAM exec comm | Education Committee | UConn Health | University | 2011 | ||
NRCAM exec comm | Research Committee | UConn Health | University | 2011 | ||
AAUP Constitution | Professional/Scientific Organization | UConn Health | University | 2011 | ||
AAUP Collective Bargaining Committee | Professional/Scientific Organization | UConn Health | University | 2011 | ||
Compensation task force | Advisory Committee | UConn Health | University | 2011 | ||
SCOB Program Review | Education Committee | Chair | UConn Health | University | 2011 | 2012 |
Neuroscience Exec comm | Education Committee | at large member | UConn Health | University | ||
CGS art comm | Advisory Committee | University |
Not accepting lab rotation students at this time
The Carson lab is studying RNA trafficking in neural cells using single molecule imaging, systems analysis and computational modeling in the Virtual Cell. Rotation students in this lab have the opportunity to learn cell culture, protein chemistry, microinjection, confocal microscopy, fluorescence correlation spectroscopy and computational cell biology. Possible rotation projects in this lab:
1) characterizing dynamic molecular assemblies involved in RNA trafficking using photo-induced biotin transfer from hnRNP A2 to other molecular partners
2) defining conditional operators (EITHER OR, BOTH AND, ONLY IF) controlling molecular interactions in RNA trafficking using cross correlation FCS.
Journal Articles
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Persistent growth of microtubules at low density.
Molecular biology of the cell 2021 Mar;32(5):435-445
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Multivalent Molecules as Modulators of RNA Granule Size and Composition.
Biophysical journal 2017 Feb;113235-245
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CGG Repeats in the 5'UTR of FMR1 RNA Regulate Translation of Other RNAs Localized in the Same RNA Granules.
PloS one 2016 Jan;11(12):e0168204
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New mechanism for CGG repeat expansion disorders.
International journal of developmental neuroscience : the official journal of the International Society for Developmental Neuroscience 2015 Dec;47(Pt A):101
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FMRP and myelin protein expression in oligodendrocytes.
Molecular and cellular neurosciences 2013 Sep;56333-41
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Conditional knockout of tumor overexpressed gene in mouse neurons affects RNA granule assembly, granule translation, LTP and short term habituation.
PloS one 2013 Jan;8(8):e69989
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Single-molecule imaging of translational output from individual RNA granules in neurons.
Molecular biology of the cell 2012 Mar;23(5):918-29
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Herpes simplex virus type 1 helicase-primase: DNA binding and consequent protein oligomerization and primase activation.
Journal of virology 2011 Jan;85(2):968-78
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Signaling from the secretory granule to the nucleus: Uhmk1 and PAM.
Molecular endocrinology (Baltimore, Md.) 2010 Aug;24(8):1543-58
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Differential subcellular distributions and trafficking functions of hnRNP A2/B1 spliceoforms.
Traffic (Copenhagen, Denmark) 2010 Jul;11(7):886-98
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Novel DNA binding properties of the Mcm10 protein from Saccharomyces cerevisiae.
The Journal of biological chemistry 2009 Sep;284(37):25412-20
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Model-based global analysis of heterogeneous experimental data using gfit.
Methods in molecular biology (Clifton, N.J.) 2009 Jan;500335-59
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Multiplexed dendritic targeting of alpha calcium calmodulin-dependent protein kinase II, neurogranin, and activity-regulated cytoskeleton-associated protein RNAs by the A2 pathway.
Molecular biology of the cell 2008 May;19(5):2311-27
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Significant proportions of nuclear transport proteins with reduced intracellular mobilities resolved by fluorescence correlation spectroscopy.
Journal of molecular biology 2007 Jan;365(1):50-65
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Heterogeneous nuclear ribonucleoprotein (hnRNP) E1 binds to hnRNP A2 and inhibits translation of A2 response element mRNAs.
Molecular biology of the cell 2006 Aug;17(8):3521-33
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A role for Sec8 in oligodendrocyte morphological differentiation.
Journal of cell science 2006 Mar;119(Pt 5):807-18
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The microtubule-associated protein tumor overexpressed gene binds to the RNA trafficking protein heterogeneous nuclear ribonucleoprotein A2.
Molecular biology of the cell 2005 Apr;16(4):1938-47
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pH microdomains in oligodendrocytes.
The Journal of biological chemistry 2004 Aug;279(35):37115-23
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RNA transport in oligodendrocytes from the taiep mutant rat.
Molecular and cellular neurosciences 2003 Dec;24(4):926-38
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A molecular mechanism for mRNA trafficking in neuronal dendrites.
The Journal of neuroscience : the official journal of the Society for Neuroscience 2003 Oct;23(26):8859-66
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Facilitation of dendritic mRNA transport by CPEB.
Genes & development 2003 Mar;17(5):638-53
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Anterograde RNA transport is inhibited in microtubule defective oligodendrocytes.
Mol. Cell Neurosci. 2003 Jan;24926-38
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Intracellular trafficking of hnRNP A2 in oligodendrocytes.
Experimental cell research 2002 Oct;279(2):310-20
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RNA trafficking signals in human immunodeficiency virus type 1.
Molecular and cellular biology 2001 Mar;21(6):2133-43
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Mutational analysis of a heterogeneous nuclear ribonucleoprotein A2 response element for RNA trafficking.
The Journal of biological chemistry 1999 Nov;274(48):34389-95
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The cis-acting RNA trafficking signal from myelin basic protein mRNA and its cognate trans-acting ligand hnRNP A2 enhance cap-dependent translation.
The Journal of cell biology 1999 Oct;147(2):247-56
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RNA on the road to myelin
Brain Cell Biology 1999 Jan;28(5-Apr):263-270
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RNA on the road to myelin.
Journal of neurocytology 1999 Jan;28(4-5):263-70
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Fluorescence quenching and dequenching analysis of RNA interactions in vitro and in vivo.
Analytical biochemistry 1998 Nov;264(2):133-40
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hnRNP A2 selectively binds the cytoplasmic transport sequence of myelin basic protein mRNA.
Biochemistry 1998 May;37(19):7021-9
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Transport and localization elements in myelin basic protein mRNA.
The Journal of cell biology 1997 Sep;138(5):1077-87
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A general computational framework for modeling cellular structure and function.
Biophysical journal 1997 Sep;73(3):1135-46
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Rearrangement and reactivation of the myelin basic protein locus in myelin-deficient (mld) mouse brain.
Journal of neurochemistry 1997 Feb;68(2):457-68
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Translations control and rna transport are mediated by the same clsitrans determinants
FASEB Journal 1997 Jan;11(9):
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Translocation of myelin basic protein mRNA in oligodendrocytes requires microtubules and kinesin.
Cell motility and the cytoskeleton 1997 Jan;38(4):318-28
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Localization of histidyl-tRNA synthetase (Jo-1) in human laryngeal epithelial carcinoma cell line (HEp-2 cells).
Cell and tissue research 1996 Dec;286(3):487-91
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Brain cytoplasmic and flagellar outer arm dyneins share a highly conserved Mr 8,000 light chain.
The Journal of biological chemistry 1996 Aug;271(32):19358-66
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Calcium induced calcium release (CICR) and volume regulation in rabbit corneal cells
FASEB Journal 1996 Jan;10(3):
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Calcium Induced Calcium Release (CICR) involvement in Regulatory Volume Decrease (RVD) in rabbit corneal epithelial cells
Investigative Ophthalmology and Visual Science 1996 Jan;37(3):
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Protein translation components are colocalized in granules in oligodendrocytes.
Journal of cell science 1995 Aug;108 ( Pt 8)(8):2781-90
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Three-dimensional organization of endoplasmic reticulum in the ventral photoreceptors of Limulus.
The Journal of comparative neurology 1994 Mar;341(2):172-83
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Scanning concentration correlation spectroscopy using the confocal laser microscope.
Biophysical journal 1994 Feb;66(2 Pt 1):502-7
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Effects of hexagonal phase induction by dolichol on phospholipid membrane permeability and morphology
International Journal of Pharmaceutics 1994 Jan;105(3):259-272
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Transport and localization of exogenous myelin basic protein mRNA microinjected into oligodendrocytes.
The Journal of cell biology 1993 Oct;123(2):431-41
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Visualizing cells in three dimensions using confocal microscopy, image reconstruction and isosurface rendering: application to glial cells in mouse central nervous system.
Scanning microscopy 1992 Jun;6(2):345-56; discussion 356-7
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Molecular genetic analysis of the mldr mouse: a spontaneous revertant at the mld locus containing a recombinant myelin basic protein gene.
Genetics 1992 Feb;130(2):367-75
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Diversification of glial lineages: a novel method to clone brain cells in vitro on nitrocellulose substratum.
Glia 1991 Jan;4(3):256-68
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Simultaneous imaging of cell and mitochondrial membrane potentials.
Biophysical journal 1989 Dec;56(6):1053-69
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Cyclic AMP regulation of P0 glycoprotein and myelin basic protein gene expression in semi-differentiated peripheral neurinoma cell line D6P2T.
Development (Cambridge, England) 1989 Jun;106(2):389-98
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Expression and localization of myelin basic protein in oligodendrocytes and transfected fibroblasts.
Journal of neurochemistry 1988 Dec;51(6):1737-45
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Expression of myelin basic protein mRNA and polypeptides in mouse oligodendrocytes in culture: differential regulation by genetic and epigenetic factors.
Brain research 1988 Apr;467(2):183-91
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Structure and expression of myelin basic protein gene sequences in the mld mutant mouse: reiteration and rearrangement of the MBP gene.
Genetics 1987 Jul;116(3):447-64
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Effect of the jimpy mutation on expression of myelin proteins in heterozygous and hemizygous mouse brain.
Journal of neurochemistry 1984 Dec;43(6):1706-15
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Myelin basic protein gene expression in quaking, jimpy, and myelin synthesis-deficient mice.
Developmental biology 1984 Nov;106(1):38-44
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The effect of the shiverer mutation on myelin basic protein expression in homozygous and heterozygous mouse brain.
Journal of neurochemistry 1983 Jun;40(6):1680-6
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Developmental regulation of myelin basic protein expression in mouse brain.
Developmental biology 1983 Apr;96(2):485-92
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Progenitors of oligodendrocytes: limiting dilution analysis in fetal rat brain culture.
Developmental biology 1983 Mar;96(1):84-8
Book Chapters
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Oligodendrocyte differentiation: Quantitative studies in primary cultures of dissociated fetal rat brain
Glial-Neuronal Communication in Development and Regeneration, 1986 Jan;737-754
Conference Papers
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Computational cell biologists snowed in at Cranwell.
Trends in cell biology 2001 Jun;11(6):236-8
Reviews
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Multiplexed RNA trafficking in oligodendrocytes and neurons.
Biochimica et biophysica acta 2008 Aug;1779(8):453-8
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Rules of engagement promote polarity in RNA trafficking.
BMC neuroscience 2006 Jan;7 Suppl 1(SUPPL. 1):S3
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Systems analysis of RNA trafficking in neural cells.
Biology of the cell / under the auspices of the European Cell Biology Organization 2005 Jan;97(1):51-62
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Fluorescence correlation spectroscopy and quantitative cell biology.
Differentiation; research in biological diversity 2004 Feb;72(1):1-10
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Computational cell biology: spatiotemporal simulation of cellular events.
Annual review of biophysics and biomolecular structure 2002 Jan;31423-41
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The balance of power in RNA trafficking.
Current opinion in neurobiology 2001 Oct;11(5):558-63
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RNA trafficking in oligodendrocytes.
Results and problems in cell differentiation 2001 Jan;3469-81
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RNA trafficking in myelinating cells.
Current opinion in neurobiology 1998 Oct;8(5):607-12