Vladimir I. Rodionov, Ph.D.Professor, Department of Cell BiologyCenter for Cell Analysis and Modeling
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Degree | Institution | Major |
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BSc | Moscow State University | Molecular Biology |
PhD | Moscow State University | Biochemistry |
Awards
Name of Award/Honor | Awarding Organization |
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Research Award for Eastern Europe | Howard Hughes Medical Institute |
Academic degree Doctor of Sciences in Cell Biology, Supreme Attestation Committe of the Russia(formal requirement for professorship in Russia) |
Name & Description | Category | Role | Type | Scope | Start Year | End Year |
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Sigma Delta Epsilon-Graduate Women in Science Program. | Advisory Committee | Ad Hoc Reviewer | External | National | 2010 | |
Programme BLANC, Agence Nationale De La Recherche (France). | Advisory Committee | Ad Hoc Reviewer | External | International | 2010 | |
National Institute of Health (Nuclear and Cytoplasmic Structure and Dynamics Scientific Review Group). | Study Section | Member | External | National | 2010 | |
Curriculum Committee; Medical Students Course “Human Biology”. | Education Committee | Member | UConn Health | University | 2008 | |
Wellcome Trust (UK). | Advisory Committee | Ad Hoc Reviewer | External | International | 2008 | |
National Institutes of Health (Cell Structure and Function Scientific Review Group). | Study Section | Member | External | National | 2007 | |
The Netherlands Organization for Health Research and Development. | Advisory Committee | Ad Hoc Reviewer | External | International | 2007 | |
UK Cancer Research Foundation. | Editorial Board | Ad Hoc Reviewer | External | National | 2007 | 2008 |
Human Frontiers Science Program. | Editorial Board | Ad Hoc Reviewer | External | National | 2007 | |
National Science Foundation (Cellular Organization). | Education Committee | Ad Hoc Reviewer | External | National | 2006 | 2010 |
Faculty of 1000 | Professional/Scientific Organization | Contributor | External | National | 2003 | |
National Science Foundation (Cellular Organization). | Advisory Committee | Panel member | External | National | 2003 | 2006 |
Faculty Search Committee, CCAM | Advisory Committee | Member | UConn Health | University | 2002 | |
Graduate School Admission Committee | Advisory Committee | Member | UConn Health | University | 2002 | 2005 |
Curriculum Committee; Graduate Course “Advanced Microscopy Techniques” | Education Committee | Member | UConn Health | University | 2002 | |
Dental Council. | Education Committee | At-Large Representative | UConn Health | University | 2001 | 2004 |
Graduate School Cell Biology Curriculum Review Committee. | Education Committee | Committee Member | UConn Health | University | 1999 | |
Biophysical Society | Professional/Scientific Organization | Member | External | National | 1997 | |
National Science Foundation (Cellular Organization). | Editorial Board | Ad Hoc Reviewer | External | National | 1997 | 2002 |
American Society for Cell Biology | Professional/Scientific Organization | Member | External | National | 1993 |
Research in this laboratory is focused on molecular mechanisms of intracellular transport and organization of microtubule cytoskeleton. The model system that is being used is melanophores, pigment cells of lower vertebrates. The only function of these large cells is synchronous transport of thousands of membrane-bounded organelles, pigment granules, which rapidly move to the cell center to form a tight aggregate or redisperse uniformly throughout the cytoplasm. During aggregation, pigment granules move along microtubules by means of cytoplasmic dynein. Pigment dispersion involves initial rapid microtubule-dependent transport to the periphery by Kinesin II and subsequent slow diffusion-like movement along the randomly arranged actin filaments. Transport is regulated by Protein Kinase A (PKA) signaling cascade. Thus, melanophores provide a unique model system for the studies of the role of cytoskeleton in intracellular transport, mechanisms of switching between the two major transport systems, and regulation of activity of motor molecules by signal transduction mechanisms.
Two recent findings define the directions of current research. First, we have shown that in microsurgically produced cytoplasmic fragments of melanophores lacking the centrosome the radial array of microtubules rapidly forms and becomes positioned to the center. Thus, membrane organelles that are normally dragged by motors to the centrosome region may themselves play an active role in organization and maintenance of radial microtubules. Digital fluorescence microscopy, photobleaching , photoactivation and microinjection of motor-specific probes are being used to test the mechanisms of self-organization and self-centering of the radial microtubule array in the fragments. Second, we have demonstrated that during dispersion the pigment granules that initially move along microtubules switch tracks and continue motion along randomly arranged actin filaments. Thus, each pigment granule bears a member of each of the families of motor molecules: cytoplasmic dynein and a kinesin-like motors (specific for microtubules) and a myosin motor (specific for actin filaments). A combination of biochemical and molecular approaches are being used to test the hypothesis that the motor molecules interact and that regulation is achieved through phosphorylation of common subunits.
Not accepting lab rotation students at this time
Lab Rotation Projects
1. Identification of Protein Kinase A adapter proteins (AKAPs). Our recent work indicates that PKA is bound to pigment granules and that this binding is mediated by adapter proteins know as AKAPs. A combination of biochemical, molecular, and mass-spectrometry approaches will be used to identify AKAPs that tie PKA to pigment granule surface and determine the role of PKA compartmentalization in pigment transport.
2. Mechanism of regulation of Kinesin II. Our preliminary data strongly suggest that the activity of kinesin II during dispersion is stimulated by PKA-dependent phosphrylation. Mass-spectrometry, site-directed mutagenesis, and microscopy approaches will be used to identify phosphorylation sites and determine the importance of Kinesin II regulation for pigment dispersion.
3. The role of actin dynamics in pigment dispersion. During dispersion, pigment granules move along the actin filaments by means of myosin Va. Based on our data we hypothesize that this actin-dependent transport involves continuous growth of actin filaments. Live imaging approaches will be used to test this hypothesis and determine whether actin assembly is coupled to myosin V activity.
Journal Articles
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Persistent growth of microtubules at low density.
Molecular biology of the cell 2021 Mar;32(5):435-445
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Optogenetic activation of Plexin-B1 reveals contact repulsion between osteoclasts and osteoblasts.
Nature communications 2017 Jun;815831
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Stimulation of microtubule-based transport by nucleation of microtubules on pigment granules.
Molecular biology of the cell 2017 Apr;281418-1425
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A minimal actomyosin-based model predicts the dynamics of filopodia on neuronal dendrites.
Molecular biology of the cell 2017 Feb;281021-1033
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Engineered tug-of-war between kinesin and dynein controls direction of microtubule transport in vivo.
Traffic (Copenhagen, Denmark) 2016 Feb;17475-86
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Cargo transport at microtubule crossings: evidence for prolonged tug-of-war between kinesin motors.
Biophysical journal 2015 Mar;108(6):1480-3
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Regulation of microtubule-based transport by MAP4.
Molecular biology of the cell 2014 Aug;25(20):3119-32
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Loss of spastin function results in disease-specific axonal defects in human pluripotent stem cell-based models of hereditary spastic paraplegia.
Stem cells (Dayton, Ohio) 2013 Oct;32(2):414-23
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Force-dependent detachment of kinesin-2 biases track switching at cytoskeletal filament intersections.
Biophysical journal 2012 Jul;103(1):48-58
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CK1 activates minus-end-directed transport of membrane organelles along microtubules.
Molecular biology of the cell 2011 Apr;22(8):1321-9
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Finding the cell center by a balance of dynein and myosin pulling and microtubule pushing: a computational study.
Molecular biology of the cell 2010 Dec;21(24):4418-27
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Novel isoform of the Xenopus tropicalis PKA catalytic alpha subunit: An example of alternative splicing.
Comparative biochemistry and physiology. Part D, Genomics & proteomics 2010 Jun;5(2):151-6
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Melanophores for microtubule dynamics and motility assays.
Methods in cell biology 2010 Jan;97401-14
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CLIP-170-dependent capture of membrane organelles by microtubules initiates minus-end directed transport.
Developmental cell 2009 Sep;17(3):323-33
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The protein kinase A-anchoring protein moesin is bound to pigment granules in melanophores.
Traffic (Copenhagen, Denmark) 2009 Feb;10(2):153-60
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Actin in dendritic spines: measurements of kinematic heterogeneity and net retrograde flow with super-resolution optical imaging
PLOS One 2009 Jan;4e7724
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Large-scale quantitative phosphoproteomic analysis of T Cell Receptor Signaling: System-wide modulation of protein-protein interaction mediated by site-specific phosphorylation.
Science Signaling 2009 Jan;18(2(84)):ra46
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Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
Science signaling 2009 Jan;2(84):ra46
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Actin dynamics is essential for myosin-based transport of membrane organelles.
Current biology : CB 2008 Oct;18(20):1581-6
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Cytoplasmic dynein is involved in the retention of microtubules at the centrosome in interphase cells.
Traffic (Copenhagen, Denmark) 2008 Apr;9(4):472-80
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Switching of membrane organelles between cytoskeletal transport systems is determined by regulation of the microtubule-based transport.
The Journal of cell biology 2007 Nov;179(4):635-41
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Microtubule motor Ncd induces sliding of microtubules in vivo.
Molecular biology of the cell 2007 Sep;18(9):3601-6
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Fluorescence microscopy of microtubules in cultured cells.
Methods in molecular medicine 2007 Jan;13793-102
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Nonlocal mechanism of self-organization and centering of microtubule asters.
Bulletin of mathematical biology 2006 Jul;68(5):1053-72
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Centering of a radial microtubule array by translocation along microtubules spontaneously nucleated in the cytoplasm.
Nature cell biology 2005 Dec;7(12):1213-8
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Multiscale trend analysis of microtubule transport in melanophores.
Biophysical journal 2005 Jun;88(6):4008-16
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Multiphoton-excited microfabrication in live cells via Rose Bengal cross-linking of cytoplasmic proteins.
Optics letters 2005 Jan;30(2):159-61
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Protein kinase A, which regulates intracellular transport, forms complexes with molecular motors on organelles.
Current biology : CB 2004 Oct;14(20):1877-81
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Intracellular actin-based transport: how far you go depends on how often you switch.
Proceedings of the National Academy of Sciences of the United States of America 2004 Sep;101(36):13204-9
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Cytoplasmic dynein nucleates microtubules to organize them into radial arrays in vivo.
Molecular biology of the cell 2004 Jun;15(6):2742-9
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Computational model of dynein-dependent self-organization of microtubule asters.
Journal of cell science 2004 Mar;117(Pt 8):1381-97
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Multiphoton excited microfabrication in live cells via rose bengal crosslinking of cytoplasmic proteins
Optics Lett. 2004 Jan;30159-161
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Switching between microtubule- and actin-based transport systems in melanophores is controlled by cAMP levels.
Current biology : CB 2003 Oct;13(21):1837-47
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Centrosome positioning in interphase cells.
The Journal of cell biology 2003 Sep;162(6):963-9
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Self-organization of a radial microtubule array by dynein-dependent nucleation of microtubules.
Proceedings of the National Academy of Sciences of the United States of America 2001 Aug;98(18):10160-5
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Digital fluorescence microscopy of cell cytoplasts with and without the centrosome.
Methods in cell biology 2001 Jan;6743-51
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Contribution of plus and minus end pathways to microtubule turnover.
Journal of cell science 1999 Jul;112 ( Pt 14)2277-89
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Centrosomal control of microtubule dynamics
Proc. Natl. Acad. USA 1999 Jan;96115-120
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Lessons from the melanophore
FASEB Journal 1999 Jan;13S221-S224
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Self-centering in cytoplasmic fragments of melanophores.
Molecular biology of the cell 1998 Jul;9(7):1613-5
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Transport and turnover of microtubules in frog neurons depend on the pattern of axonal growth.
The Journal of neuroscience : the official journal of the Society for Neuroscience 1998 Feb;18(3):821-9
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Functional coordination of microtubule-based and actin-based motility in melanophores.
Current biology : CB 1998 Jan;8(3):165-8
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Microtubule release from the centrosome
Proc. Natl. Acad.Sci. USA 1997 Jan;945078-5083
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Microtubule treadmilling in vivo
Science 1997 Jan; 275215-218
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Self-centering activity of cytoplasm
Nature 1997 Jan;386170-173
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Microtubule dynamics in fish melanophores
J. Cell Biol. 1994 Jan; 1261455-1464
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Kinesin-like molecules involved in spindle formation.
Journal of cell science 1993 Dec;106 ( Pt 4)1179-88
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Microtubule-dependent control of cell shape and pseudopodial activity is inhibited by the antibody to kinesin motor domain.
The Journal of cell biology 1993 Dec;123(6 Pt 2):1811-20
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Kinesin is responsible for centrifugal movement of pigment granules in melanophores.
Proceedings of the National Academy of Sciences of the United States of America 1991 Jun;88(11):4956-60
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Microtubule-associated proteins and microtubule-based translocators have different binding sites on tubulin molecule.
The Journal of biological chemistry 1990 Apr;265(10):5702-7
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Effect of MAP 1, MAP 2, and tau-proteins on structural parameters of tubulin assemblies.
Acta histochemica. Supplementband 1990 Jan;39357-64
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[Microinjections of antibodies against microtubule proteins: the effect on distribution and movement of melanosomes in melanophores].
Doklady Akademii nauk SSSR 1988 Jan;300(6):1469-72
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The movement of melanosomes in melanophore fragments obtained by laser microbeam irradiation.
Cell biology international reports 1987 Aug;11(8):565-72
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Vimentin intermediate filaments in fish melanophores
J. Cell Sci. 1987 Jan;88649-655
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[A cytoskeletal protein with a molecular weight of 100 kD is a component of the endosomes participating in receptor-mediated endocytosis].
Tsitologiia 1986 Nov;28(11):1222-6
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[Localization of the light chain (LC-1) of the microtubule-associated protein MAP-1 in the tubulin-binding portion of the molecule].
Doklady Akademii nauk SSSR 1986 Jan;286(1):224-6
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Identification of a 34-kD polypeptide as a light chain of microtubule-associated protein-1 (MAP-1) and its association with a MAP-1 peptide that binds to microtubules.
The Journal of cell biology 1986 Jan;102(3):1060-6
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Identification of a 100 kD protein associated with microtubules, intermediate filaments and coated vesicles in cultured cells.
Experimental cell research 1985 Jan;159(2):377-87
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MAP2 competes with MAP1 for binding to microtubules
Biochem. Biophys. Res. Commun. 1984 Jan;119(1):173-178
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[Interaction of MAP2 protein of cytoplasmic microtubules with axoneme microtubules].
Doklady Akademii nauk SSSR 1983 Jan;270(5):1249-53
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[Microtubule-associated MAP1 protein: isolation and evidence of its polymerizing activity].
Doklady Akademii nauk SSSR 1981 Jan;261(3):760-2
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Purification of high-Mr microtubule proteins MAP1 and MAP2.
FEBS Lett. 1981 Jan;(135):237-240
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High molecular weight protein MAP 2 promoting microtubule assembly in vitro is associated with microtubules in cells
Cell Biol. Int. Rep. 1980 Jan;41017-1024
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Polymerization of purified tubulin by synthetic polycations.
FEBS letters 1978 Nov;95(2):343-6
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[Microtubule assembly without polymerizing protein factors in the presence of glycerin].
Doklady Akademii nauk SSSR 1978 Jan;239(1):231-3
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Purification of a thermostable high molecular weight factor promoting tubulin polymerization.
FEBS letters 1978 Jan;95(2):339-42
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32S Tubulin oligomer. The resistance to factors suppressing the microtubule formation.
Biokhimiia 1976 Jan;412068-2074
Abstracts
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Search-and-capture of membrane organelles by dynamic microtubules is required for initiation of dynein-dependent transport.
47th Annual Meeting of the American Society for Cell Biology 2007 Jan;Abstract #694
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Identification of AKAPs involved in regulation of pigment transport in melanophores
Mol. Biol. Cell 2005 Jan;16448a
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Computational model of pigment transport in fish melanophores
Mol. Biol. Cell 2004 Jan;15404a
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Microtubule sliding induced by microtubule-dependent motor Ncd
Mol. Biol. Cell 2004 Jan;1533a
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Multiscale trend analysis of microtubule-dependent transport in melanophores
Mol. Biol. Cell 2004 Jan;15403a
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Centering force generation in cytoplasmic fragments of melanophores
Mol. Biol. Cell 2003 Jan;14449a
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Signaling molecules form a complex with molecular motors that is essential for regulation of organelle transport
Mol. Biol. Cell 2003 Jan;14332a
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Modulation of cAMP levels to control transfer between microtubule and actin-based transport
Mol. Biol. Cell 2002 Jan;13473a
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Nucleation of microtubules by cytoplasmic dynein
Mol. Biol. Cell 2002 Jan;1343a
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The nature of the centering force
Mol. Biol. Cell 2002 Jan;13199a
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Self-organization of a radial microtubule array in cytoplasmic fragments of melanophores involves the formation of a new microtubule-organizing center.
Mol. Biol. Cell 2000 Jan;11360a
Conference Papers
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Activation of the minus-end-directed microtubule transport of pigment granules in melanophores correlates with CK1-dependent phosphorylation of the dynein intermediate chain
2010 Jan;Abstract #2015
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Capture of membrane organelles by the growing microtubule plus-ends is facilitated by readjustment of microtubule dynamics inducing accumulation of microtubule plus-ends at the cell periphery.
2010 Jan;Abstract #2016
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Regulation of microtubule dynamics enhances capture of pigment granules by growing microtubule ends during pigment aggregation in melanophores.
2010 Jan;
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Regulation of microtubule dynamics enhances capture of pigment granules by growing microtubule ends during pigment aggregation in melanophores.
2009 Jan;Abstract #1865
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Signaling unit composed PP2A and CK1 is responsible for a rapid increase in the minus-end runs of pigment granules along microtubules during pigment aggregation in melanophores.
2009 Jan;Abstract #1864.
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Moesin anchors protein kinase A on pigment granules to regulate pigment dispersion in melanophores.
2008 Jan;Abstract #306.
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Regulaiton of the CLIP-170-dependent interaction of membrane organelles with the plus ends of cytoplasmic microtubules essential for initiation of the minus-end directed transport.
2008 Jan;Abstract #298
Short Surveys
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Intracellular organelle transport: few motors, many signals.
Trends in cell biology 2005 Aug;15(8):396-8
Title or Abstract | Type | Sponsor/Event | Date/Year | Location |
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Regulation of intracellular transport in melanophores | Talk | Physiology Course | 2010 | Marine Biological Laboratory, Woods Hole |
Regulation of intracellular transport in melanophores | Talk | Physiology Course | 2010 | Marine Biological Laboratory, Woods Hole |
Regulation of molecular motors in melanophores Cargo transport by single molecular motors | Talk | 53d Annual Meeting of the Biophysical Society Symposium | 2009 | Boston, MA |
Intracellular transport in black and white | Talk | NHLBI Seminar | 2009 | Washington, D.C. |
Intracellular transport in black and white | Talk | Center for Non-linear Dynamics Seminar | 2009 | University of Austin, TX. |
Intracellular transport in black and white | Talk | Seminar | 2007 | Albert Einstein College of Medicine, New York. |
Intracellular transport in black and white | Talk | Musculoskeletal Institute Seminar | 2007 | University of Pennsylvania. |
Computational modeling of pigment transport in melanophores | Talk | 44th Annual Meeting of the American Society for Cell Biology | 2004 | Washington, D.C. |
Motile and Contractile Systems Centrosome positioning is maintained by opposing forces generated by actomyosin system and cytoplasmic dynein | Talk | Gordon Research Conference | 2003 | |
Regulation and coordination of molecular motors in melanophores | Talk | Marine Biological Laboratory | 2003 | Woods Hole, MA |
Microtubule arrays, Cytomechanical modules | Talk | Friday Harbor Laboratories | 2003 | |
Finding the center of a fragment | Talk | 41st Annual Meeting of the American Society for Cell Biology | 2000 | Washington, D.C. |
Coordination of microtubule- and actin-dependent transport in melanophores | Talk | Seminar in the University of Linkoping | 1999 | Sweden |
Self-organization of the radial microtubule array | Talk | Seminar in the Swiss Federal Institute of Technology | 1999 | Lausanne (Switzerland) |
Organization of Cytoplasm by Molecular Motors | Talk | Seminar in the Queens College, New York | 1998 | Queens College, New York |
Organization of Cytoplasm by Molecular Motors | Talk | Seminar in the Dept. of Biology | 1998 | Louisiana State University |
Organization of Cytoplasm by Molecular Motors | Talk | Seminar in the Northwestern University Medical School | 1998 | Northwestern University Medical School |
“Motile and Contractile Systems” “Centrosomal control of microtubule dynamics”. | Talk | Gordon Research Conference | 1998 | |
Self-Centering Activity of Cytoplasm | Talk | Seminar in the Dept. of Anatomy | 1996 | Indiana University Medical School |
Microtubule dynamics in fish melanophores | Talk | 32nd Annual Meeting of the American Society For Cell Biology | 1991 | Boston |
Mechanisms of motion of pigment granules in melanophores | Talk | Seminar in the Dept. of Physicians and Surgeons | 1990 | Columbia University |